STRINGSTRING
RB2654_11348 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_11348" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_11348Uncharacterized protein (124 aa)    
Predicted Functional Partners:
RB2654_11353
Cobalamin biosynthetic protein CobC (314 aa)
 
          0.898
cobD
Cobalamin biosynthesis protein CobD ; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group (303 aa)
              0.880
RB2654_11363
Uncharacterized protein (397 aa)
              0.718
RB2654_11448
Uncharacterized protein (104 aa)
   
          0.654
RB2654_16301
Uncharacterized protein (399 aa)
 
          0.633
RB2654_05165
Uncharacterized protein (319 aa)
   
          0.619
RB2654_02964
Uncharacterized protein (291 aa)
   
          0.596
RB2654_02459
Uncharacterized protein (164 aa)
   
          0.546
RB2654_16321
Cobalamin biosynthesis precorrin-3 methylase (611 aa)
 
          0.526
RB2654_01700
Sulfur oxidation F protein (415 aa)
   
          0.509
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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