STRINGSTRING
RB2654_11478 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_11478" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_11478Uncharacterized protein (332 aa)    
Predicted Functional Partners:
RB2654_11473
Uncharacterized protein (136 aa)
              0.862
RB2654_12884
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (372 aa)
     
      0.703
RB2654_23328
Uncharacterized protein (307 aa)
 
  0.699
RB2654_11468
Thiol-disulfide interchange protein, putative (185 aa)
              0.689
RB2654_17081
3-beta hydroxysteroid dehydrogenase/isomerase family protein, putative (327 aa)
 
  0.667
RB2654_01760
Probable Phytoene/squalene synthetase (250 aa)
   
 
  0.658
RB2654_15489
Membrane protein, putative (208 aa)
   
          0.647
RB2654_17041
Probable coenzyme A ligase (908 aa)
     
 
  0.617
RB2654_20323
Probable UDPglucose 4-epimerase (304 aa)
   
  0.609
RB2654_12184
Putative sugar nucleotide dehydratase (323 aa)
   
  0.609
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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