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RB2654_11533 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_11533" - Rhodanese-like protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_11533Rhodanese-like protein (209 aa)    
Predicted Functional Partners:
RB2654_11538
LysM domain protein (284 aa)
              0.824
RB2654_11528
Uncharacterized protein (24 aa)
              0.738
RB2654_01680
Sulfur oxidation B protein (565 aa)
 
          0.643
RB2654_11523
FolC bifunctional protein (423 aa)
              0.482
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta ; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA (333 aa)
              0.482
RB2654_11513
Uncharacterized protein (304 aa)
              0.426
RB2654_01665
Sulfur oxidation protein SoxY (138 aa)
 
          0.413
RB2654_00340
Transposase orfB (55 aa)
   
          0.411
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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