STRINGSTRING
RB2654_11538 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_11538" - LysM domain protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_11538LysM domain protein (284 aa)    
Predicted Functional Partners:
RB2654_11533
Rhodanese-like protein (209 aa)
              0.824
RB2654_13034
LysM/phospholipid-binding domain protein (137 aa)
 
          0.779
RB2654_02189
LysM domain protein (624 aa)
 
          0.768
RB2654_11528
Uncharacterized protein (24 aa)
              0.709
RB2654_11523
FolC bifunctional protein (423 aa)
              0.475
accD
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta ; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA (333 aa)
              0.469
RB2654_11513
Uncharacterized protein (304 aa)
              0.414
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (6%) [HD]