STRINGSTRING
RB2654_11578 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_11578" - DNA topoisomerase IV subunit A in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_11578DNA topoisomerase IV subunit A (191 aa)    
Predicted Functional Partners:
RB2654_11568
Uncharacterized protein (68 aa)
 
          0.899
RB2654_11573
Oxidoreductase, short-chain dehydrogenase/reductase family protein (278 aa)
              0.859
RB2654_03979
Uncharacterized protein (192 aa)
   
          0.777
RB2654_13339
Possible TolA protein (426 aa)
   
          0.750
RB2654_21078
Uncharacterized protein (174 aa)
   
          0.742
RB2654_12314
Uncharacterized protein (44 aa)
   
          0.686
RB2654_17826
Uncharacterized protein (91 aa)
   
          0.669
RB2654_02539
Uncharacterized protein (176 aa)
   
          0.664
RB2654_11563
Uncharacterized protein (190 aa)
              0.657
parC
Topoisomerase IV subunit A ; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule (856 aa)
              0.652
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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