STRINGSTRING
RB2654_11698 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_11698" - Transglutaminase-like in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_11698Transglutaminase-like (258 aa)    
Predicted Functional Partners:
RB2654_12359
Uncharacterized protein (474 aa)
 
        0.862
RB2654_02894
Uncharacterized protein (507 aa)
 
        0.857
RB2654_12364
Uncharacterized protein (311 aa)
 
        0.854
RB2654_12369
Uncharacterized protein (249 aa)
 
          0.768
RB2654_02884
Transglutaminase-like protein (293 aa)
 
          0.753
RB2654_12374
Uncharacterized protein (245 aa)
 
        0.690
RB2654_02899
Transglutaminase-like domain protein (1118 aa)
 
          0.604
RB2654_02889
Uncharacterized protein (320 aa)
 
        0.588
RB2654_11133
Uncharacterized protein (207 aa)
   
          0.546
RB2654_11703
Uncharacterized protein (347 aa)
              0.513
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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