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mepA protein (Maritimibacter alkaliphilus) - STRING interaction network
"mepA" - Penicillin-insensitive murein endopeptidase in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mepAPenicillin-insensitive murein endopeptidase (317 aa)    
Predicted Functional Partners:
RB2654_11904
Membrane protein, putative (463 aa)
 
          0.895
RB2654_11894
Uncharacterized protein (318 aa)
              0.880
RB2654_18958
Uncharacterized protein (333 aa)
   
          0.734
RB2654_11889
Membrane protein, putative (213 aa)
              0.707
RB2654_11909
Uncharacterized protein (177 aa)
              0.695
RB2654_18948
Uncharacterized protein (491 aa)
   
          0.693
RB2654_11959
Ribonuclease T2 family protein (210 aa)
   
          0.678
RB2654_16711
Mandelate racemase/muconate lactonizing enzyme family protein (321 aa)
   
      0.528
RB2654_11914
YGGT family protein (91 aa)
              0.521
RB2654_11884
Peptidyl-tRNA hydrolase domain protein (137 aa)
 
          0.499
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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