STRINGSTRING
RB2654_11954 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_11954" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_11954Uncharacterized protein (252 aa)    
Predicted Functional Partners:
RB2654_02599
Uncharacterized protein (168 aa)
   
          0.778
RB2654_08862
Uncharacterized protein (169 aa)
   
          0.771
RB2654_07686
Uncharacterized protein (91 aa)
   
     
  0.765
recO
Recombination protein O ; Involved in DNA repair and RecF pathway recombination (246 aa)
   
          0.761
RB2654_16381
DNA-binding protein, putative (120 aa)
   
          0.752
RB2654_04014
Uncharacterized protein (217 aa)
   
          0.750
lysS
Lysyl-tRNA synthetase (525 aa)
   
          0.745
yidC
Membrane protein YidC ; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins (613 aa)
   
          0.743
RB2654_13680
Helicase, UvrD/Rep family protein (1119 aa)
   
          0.739
RB2654_13474
Uncharacterized protein (219 aa)
   
          0.738
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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