STRINGSTRING
RB2654_12089 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_12089" - ABC branched amino acid transporter family, inner membrane subunit in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_12089ABC branched amino acid transporter family, inner membrane subunit (328 aa)    
Predicted Functional Partners:
RB2654_12079
ABC branched amino acid transporter family, inner membrane subunit (358 aa)
 
  0.998
RB2654_12094
Branched-chain amino acid ABC transporter, ATP-binding protein (273 aa)
 
  0.992
RB2654_12074
Branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid binding protein, putative (428 aa)
 
   
  0.991
RB2654_01865
Branched-chain amino acid ABC transporter, permease protein (365 aa)
 
  0.990
RB2654_12069
Branched-chain amino acid ABC transporter, ATP-binding protein (275 aa)
 
  0.990
RB2654_23403
Probable amino-acid transmembrane abc transporter protein (298 aa)
 
  0.990
RB2654_01875
Branched-chain amino acid ABC transporter, ATP-binding protein (253 aa)
 
  0.980
RB2654_17056
ABC transporter permease protein (323 aa)
 
  0.979
RB2654_04456
ABC branched-chain amino acid transporter family, inner membrane subunit (433 aa)
 
 
  0.978
RB2654_23393
Branched-chain amino acid ABC transporter, ATP-binding protein (235 aa)
 
  0.973
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (8%) [HD]