STRINGSTRING
RB2654_12229 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_12229" - Glycosyl transferase, group 1 in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_12229Glycosyl transferase, group 1 (342 aa)    
Predicted Functional Partners:
RB2654_12234
ATP-binding protein of ABC transporter (617 aa)
              0.860
RB2654_12189
Glycosyl transferase, group 1 (379 aa)
 
          0.706
RB2654_12219
Putative lipopolysaccharide biosynthesis protein (359 aa)
              0.536
RB2654_12199
Uncharacterized protein (384 aa)
 
          0.524
RB2654_12224
Uncharacterized protein (305 aa)
              0.516
RB2654_12214
Uncharacterized protein (467 aa)
              0.515
RB2654_12209
Uncharacterized protein (305 aa)
              0.463
RB2654_12194
Hypothetical mannosyltransferase (377 aa)
              0.463
RB2654_12204
Probable glycosyl transferase protein (281 aa)
              0.458
RB2654_15776
dTDP-4-dehydrorhamnose 3,5-epimerase (193 aa)
              0.435
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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