STRINGSTRING
RB2654_12379 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_12379" - C4-dicarboxylate transport sensor protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_12379C4-dicarboxylate transport sensor protein (576 aa)    
Predicted Functional Partners:
RB2654_12384
C4-dicarboxylate transport transcriptional regulatory protein (408 aa)
 
   
  0.997
RB2654_02100
C4-dicarboxylate transport transcriptional regulatory protein DctD (439 aa)
 
   
  0.977
RB2654_20783
Two component, sigma54 specific, transcriptional regulator, fis family protein (468 aa)
       
  0.916
RB2654_03229
Nitrogen assimilation regulatory protein NtrX (478 aa)
 
   
  0.842
RB2654_03219
Nitrogen metabolism transcriptional regulator, NtrC (453 aa)
 
   
  0.826
RB2654_12434
TRAP transporter, DctQ subunit (216 aa)
 
     
  0.756
RB2654_11934
Sensor histidine kinase/response regulator (600 aa)
 
   
  0.729
RB2654_12374
Uncharacterized protein (245 aa)
              0.686
RB2654_12369
Uncharacterized protein (249 aa)
              0.676
RB2654_12429
TRAP transporter solute receptor, DctP family protein (336 aa)
 
     
  0.648
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (7%) [HD]