STRINGSTRING
RB2654_12389 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_12389" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_12389Uncharacterized protein (768 aa)    
Predicted Functional Partners:
RB2654_12394
Uncharacterized protein (356 aa)
 
   
    0.988
RB2654_12439
TRAP transporter, DctM subunit (465 aa)
 
   
 
0.916
RB2654_12429
TRAP transporter solute receptor, DctP family protein (336 aa)
       
    0.912
RB2654_12434
TRAP transporter, DctQ subunit (216 aa)
       
    0.911
RB2654_09424
TRAP-type uncharacterized transport system, periplasmic component (323 aa)
 
          0.869
RB2654_06639
Immunogenic protein (319 aa)
 
          0.868
RB2654_00400
Uncharacterized protein (329 aa)
 
          0.866
RB2654_00110
Uncharacterized protein (329 aa)
 
          0.865
RB2654_18041
Probable immunogenic protein (318 aa)
 
          0.863
RB2654_11748
TRAP transporter solute receptor, TAXI family protein (321 aa)
          0.863
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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