STRINGSTRING
RB2654_12439 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_12439" - TRAP transporter, DctM subunit in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_12439TRAP transporter, DctM subunit (465 aa)    
Predicted Functional Partners:
RB2654_12434
TRAP transporter, DctQ subunit (216 aa)
 
 
  0.998
RB2654_12429
TRAP transporter solute receptor, DctP family protein (336 aa)
 
  0.997
RB2654_19518
Putative ABC transporter periplasmic substrate-binding protein (324 aa)
 
  0.929
RB2654_12389
Uncharacterized protein (768 aa)
 
   
 
0.916
RB2654_12394
Uncharacterized protein (356 aa)
       
    0.912
RB2654_21293
C4-dicarboxylate-binding periplasmic protein (328 aa)
 
  0.907
RB2654_06749
Probable extracellular solute-binding protein (337 aa)
 
 
  0.904
RB2654_23268
Putative extracellular solute-binding protein (328 aa)
 
 
  0.824
RB2654_02764
TRAP family transporter, periplasmic substrate binding subunit (328 aa)
 
 
  0.717
RB2654_13204
TRAP family transporter, periplasmic substrate binding subunit (328 aa)
 
 
  0.712
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (9%) [HD]