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RB2654_12524 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_12524" - DoxD-like family protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_12524DoxD-like family protein (134 aa)    
Predicted Functional Partners:
RB2654_12534
Uncharacterized protein (253 aa)
 
          0.702
RB2654_18181
Transporter (142 aa)
   
          0.688
RB2654_12529
Uncharacterized protein (434 aa)
 
          0.685
RB2654_12519
Probable FAD-dependent monooxygenase (401 aa)
              0.605
RB2654_01930
Uncharacterized protein (256 aa)
   
          0.569
RB2654_20483
Uncharacterized protein (273 aa)
   
          0.565
RB2654_07224
Sugar ABC transporter, periplasmic sugar-binding protein (396 aa)
   
          0.543
RB2654_08522
Possible acetyltransferase (GNAT) family protein (183 aa)
   
          0.495
RB2654_11413
Acetyltransferase, GNAT family protein (149 aa)
   
          0.446
RB2654_17221
Uncharacterized protein (266 aa)
   
          0.435
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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