STRINGSTRING
RB2654_12529 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_12529" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_12529Uncharacterized protein (434 aa)    
Predicted Functional Partners:
RB2654_12534
Uncharacterized protein (253 aa)
 
          0.972
RB2654_20733
Uncharacterized protein (329 aa)
   
          0.765
RB2654_12524
DoxD-like family protein (134 aa)
 
          0.685
RB2654_02174
Uncharacterized protein (151 aa)
   
          0.669
RB2654_01020
Uncharacterized protein (146 aa)
   
          0.596
RB2654_04681
Outer membrane protein, OmpA/MotB family protein (647 aa)
   
          0.578
RB2654_20843
Uncharacterized protein (468 aa)
   
          0.573
RB2654_17916
Uncharacterized protein (244 aa)
   
          0.548
RB2654_13019
Uncharacterized protein (260 aa)
   
          0.526
RB2654_08677
Uncharacterized protein (225 aa)
   
          0.512
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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