STRINGSTRING
RB2654_12709 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_12709" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_12709Uncharacterized protein (219 aa)    
Predicted Functional Partners:
RB2654_00270
Transcriptional regulator-like (248 aa)
   
          0.765
RB2654_12694
Uncharacterized protein (339 aa)
 
          0.755
RB2654_12704
Ornithine cyclodeaminase (337 aa)
 
          0.669
RB2654_06949
Transcriptional regulator (228 aa)
   
          0.619
RB2654_12699
Succinic semialdehyde dehydrogenase (493 aa)
              0.609
RB2654_08267
Transcriptional regulator, GntR family protein (213 aa)
   
          0.595
RB2654_10698
Transcriptional regulator, GntR family protein (221 aa)
   
          0.509
RB2654_23528
Transcriptional regulatory protein (226 aa)
   
          0.503
RB2654_07174
Uncharacterized protein (223 aa)
   
          0.486
RB2654_20648
Transcriptional regulator, GntR family protein (218 aa)
   
          0.484
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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