STRINGSTRING
RB2654_12939 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_12939" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_12939Uncharacterized protein (84 aa)    
Predicted Functional Partners:
RB2654_17916
Uncharacterized protein (244 aa)
   
          0.728
dapD
Tetrahydrodipicolinate N-succinyltransferase (275 aa)
              0.592
RB2654_12929
Cytokinin riboside 5’-monophosphate phosphoribohydrolase (282 aa)
 
          0.529
RB2654_10019
Cytochrome c oxidase, cbb3-type, subunit IV (62 aa)
   
          0.522
RB2654_12944
K+-dependent Na+/Ca+ exchanger related-protein (318 aa)
              0.505
RB2654_20183
Acyl carrier protein (87 aa)
   
          0.502
RB2654_05892
Major facilitator superfamily permease (418 aa)
   
          0.449
RB2654_12924
Uncharacterized protein (262 aa)
              0.444
RB2654_13004
Putative S-adenosyl L-homocysteine hydrolase (187 aa)
   
          0.428
RB2654_05080
Methyltransferase, FkbM family protein (251 aa)
   
          0.417
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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