STRINGSTRING
RB2654_12979 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_12979" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_12979Uncharacterized protein (365 aa)    
Predicted Functional Partners:
RB2654_04466
Type I secretion target repeat protein (229 aa)
   
          0.775
RB2654_04339
Uncharacterized protein (412 aa)
   
          0.759
RB2654_11503
Uncharacterized protein (257 aa)
   
          0.740
RB2654_13269
Core-2/I-branching enzyme family protein (564 aa)
   
          0.733
RB2654_10413
EpsK domain protein (525 aa)
   
          0.723
RB2654_07681
Uncharacterized protein (291 aa)
   
          0.721
RB2654_11498
Uncharacterized protein (123 aa)
   
          0.720
RB2654_13264
Uncharacterized protein (479 aa)
   
          0.717
RB2654_17321
Uncharacterized protein (338 aa)
   
          0.714
RB2654_13299
ABC transporter, permease protein (261 aa)
   
          0.712
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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