STRINGSTRING
RB2654_13074 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_13074" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_13074Uncharacterized protein (417 aa)    
Predicted Functional Partners:
RB2654_13079
Uncharacterized HemY-like membrane protein (504 aa)
 
          0.956
RB2654_13069
Uroporphyrinogen-III synthase, putative (221 aa)
 
          0.776
RB2654_20848
Uncharacterized protein (339 aa)
   
          0.737
RB2654_08577
Uncharacterized protein (293 aa)
   
          0.713
RB2654_13454
Transcriptional regulator, MarR family protein (148 aa)
   
          0.690
RB2654_08777
Uncharacterized protein (139 aa)
   
          0.683
RB2654_08957
Rhomboid family protein (230 aa)
   
          0.677
RB2654_19743
Uncharacterized protein (163 aa)
   
          0.657
RB2654_16831
Acetyltransferase, GNAT family protein (231 aa)
   
          0.639
RB2654_15494
Uncharacterized protein (217 aa)
   
          0.639
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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