STRINGSTRING
RB2654_13104 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_13104" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_13104Uncharacterized protein (294 aa)    
Predicted Functional Partners:
RB2654_13094
Membrane protein (507 aa)
 
          0.924
RB2654_13084
Uncharacterized protein (411 aa)
 
          0.906
RB2654_13109
Transcriptional regulator, IclR family protein (261 aa)
 
          0.848
RB2654_13114
Uncharacterized protein (450 aa)
 
          0.779
RB2654_13089
Aldehyde dehydrogenase family protein (494 aa)
 
          0.750
RB2654_13099
Uncharacterized protein (180 aa)
              0.691
RB2654_07940
Putative membrane protein (506 aa)
 
          0.616
RB2654_09169
TRAP dicarboxylate transporter, DctP subunit (351 aa)
   
          0.594
RB2654_14120
Putative 2-dehydro-3-deoxygalactonokinase (89 aa)
   
          0.537
RB2654_09919
Membrane protein (510 aa)
 
          0.498
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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