STRINGSTRING
RB2654_13204 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_13204" - TRAP family transporter, periplasmic substrate binding subunit in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_13204TRAP family transporter, periplasmic substrate binding subunit (328 aa)    
Predicted Functional Partners:
RB2654_13214
Putative membrane protein (434 aa)
 
 
  0.998
RB2654_13159
TRAP-T family transporter, DctM (12 TMs) subunit (432 aa)
 
 
  0.986
RB2654_13169
TRAP-T family transporter, DctP (Periplasmic binding) subunit (362 aa)
 
   
 
0.930
RB2654_09159
TRAP dicarboxylate transporter, DctM subunit, putative (498 aa)
 
 
  0.892
RB2654_23258
TRAP transporter, DctM subunit (434 aa)
 
 
  0.890
RB2654_07581
Uncharacterized protein (430 aa)
 
 
  0.883
RB2654_19478
TrapT family, dctM subunit, C4-dicarboxylate transport (647 aa)
 
 
  0.874
RB2654_02799
TrapT family, dctM subunit, C4-dicarboxylate transport (639 aa)
 
 
  0.869
RB2654_13209
Uncharacterized protein (172 aa)
              0.866
RB2654_13224
Uncharacterized protein (107 aa)
              0.859
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (13%) [HD]