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RB2654_13244 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_13244" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_13244Uncharacterized protein (191 aa)    
Predicted Functional Partners:
RB2654_19633
Glycosyl transferase, group 2 family protein (224 aa)
          0.979
RB2654_01810
Radical SAM domain protein (315 aa)
 
          0.869
RB2654_10863
Hypothetical transmemebrane protein (261 aa)
 
          0.776
rnr
Ribonuclease R ; 3’-5’ exoribonuclease that releases 5’-nucleoside monophosphates and is involved in maturation of structured RNAs (751 aa)
              0.764
RB2654_13249
Exonuclease, putative (203 aa)
              0.618
RB2654_09614
Membrane protein, putative (227 aa)
 
          0.587
RB2654_22138
Membrane protein, putative (220 aa)
 
          0.580
RB2654_20438
Purine nucleoside phosphorylase, probable 5’-methylthioadenosinephosphorylase (289 aa)
 
          0.568
RB2654_02964
Uncharacterized protein (291 aa)
 
          0.566
RB2654_10858
Mercuric reductase, putative (455 aa)
 
          0.536
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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