STRINGSTRING
RB2654_13389 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_13389" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_13389Uncharacterized protein (337 aa)    
Predicted Functional Partners:
RB2654_13394
DNA ligase (519 aa)
  0.997
RB2654_21323
ATP-dependent helicase, DEAD/DEAH box family protein (797 aa)
 
          0.868
RB2654_21318
Putative metallo-phosphoesterase (216 aa)
 
          0.867
atpA
F-ATPase subunit alpha ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (513 aa)
 
        0.701
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1415 aa)
     
    0.671
RB2654_10393
DNA polymerase I (932 aa)
     
  0.617
RB2654_23108
Uncharacterized protein (391 aa)
     
  0.602
RB2654_12304
Uncharacterized protein (243 aa)
   
    0.551
RB2654_09654
Uncharacterized protein (265 aa)
   
    0.551
RB2654_02964
Uncharacterized protein (291 aa)
   
    0.551
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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