STRINGSTRING
RB2654_13394 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_13394" - DNA ligase in Maritimibacter alkaliphilus
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_13394DNA ligase (519 aa)    
Predicted Functional Partners:
RB2654_13389
Uncharacterized protein (337 aa)
  0.997
RB2654_12884
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (372 aa)
     
  0.966
RB2654_10393
DNA polymerase I (932 aa)
   
  0.876
RB2654_21323
ATP-dependent helicase, DEAD/DEAH box family protein (797 aa)
 
          0.868
RB2654_21318
Putative metallo-phosphoesterase (216 aa)
 
          0.866
ligA
Polydeoxyribonucleotide synthase [NAD(+)] ; DNA ligase that catalyzes the formation of phosphodiester linkages between 5’-phosphoryl and 3’-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA (710 aa)
     
 
  0.863
RB2654_23108
Uncharacterized protein (391 aa)
     
  0.762
RB2654_19073
Ribonucleoside-diphosphate reductase, putative (758 aa)
     
   
  0.743
RB2654_04361
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent (1230 aa)
     
   
  0.743
atpA
F-ATPase subunit alpha ; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit (513 aa)
 
        0.696
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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