STRINGSTRING
RB2654_13680 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_13680" - Helicase, UvrD/Rep family protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_13680Helicase, UvrD/Rep family protein (1119 aa)    
Predicted Functional Partners:
RB2654_13685
Putative Helicase/Exonuclease (985 aa)
 
 
  0.991
RB2654_09009
ATPase (509 aa)
 
  0.984
RB2654_13700
Uncharacterized protein (162 aa)
              0.880
RB2654_13695
Uncharacterized protein (339 aa)
              0.880
RB2654_13690
Nucleotidyltransferase family protein (230 aa)
              0.880
RB2654_13675
Thioredoxin (106 aa)
              0.841
RB2654_13705
Uncharacterized protein (534 aa)
 
          0.819
RB2654_02599
Uncharacterized protein (168 aa)
   
          0.769
recF
DNA replication and repair protein RecF ; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP (371 aa)
   
 
  0.763
recO
Recombination protein O ; Involved in DNA repair and RecF pathway recombination (246 aa)
   
   
  0.746
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (7%) [HD]