STRINGSTRING
RB2654_13890 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_13890" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_13890Uncharacterized protein (7434 aa)    
Predicted Functional Partners:
RB2654_13895
Uncharacterized protein (423 aa)
 
          0.868
RB2654_13885
Transcriptional regulator, LuxR family/hydrolase, alpha/beta fold family protein (582 aa)
              0.616
RB2654_18538
SapC-related protein (238 aa)
 
          0.532
RB2654_11593
Uncharacterized protein (425 aa)
   
          0.520
RB2654_21173
Uncharacterized protein (307 aa)
   
          0.499
RB2654_11598
Uncharacterized protein (417 aa)
   
          0.492
RB2654_08187
Uncharacterized protein (166 aa)
   
          0.452
RB2654_00255
Putative transposase (145 aa)
   
          0.429
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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