STRINGSTRING
RB2654_13940 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_13940" - Uroporphyrin-III C/tetrapyrrole in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_13940Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (307 aa)    
Predicted Functional Partners:
RB2654_01785
Precorrin-6x reductase (243 aa)
 
 
  0.997
RB2654_16326
Precorrin-4 C11-methyltransferase (263 aa)
 
 
  0.996
RB2654_12999
Uroporphyrin-III C-methyltransferase-like ; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme (476 aa)
   
 
  0.968
RB2654_16311
CobL, precorrin-6Y C5,15-methyltransferase (401 aa)
 
   
  0.957
RB2654_16321
Cobalamin biosynthesis precorrin-3 methylase (611 aa)
   
 
  0.937
RB2654_13945
Transcriptional regulator (313 aa)
              0.860
RB2654_16306
Precorrin-8X methylmutase (215 aa)
 
   
  0.844
RB2654_13935
Uncharacterized protein (31 aa)
              0.767
cobQ
Cobyric acid synthase ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation (482 aa)
 
   
  0.720
cobD
Cobalamin biosynthesis protein CobD ; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group (303 aa)
 
   
  0.705
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (6%) [HD]