STRINGSTRING
RB2654_13945 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_13945" - Transcriptional regulator in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_13945Transcriptional regulator (313 aa)    
Predicted Functional Partners:
RB2654_13940
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase (307 aa)
              0.860
RB2654_13935
Uncharacterized protein (31 aa)
              0.767
RB2654_21658
LysR family transcriptional regulatory protein (325 aa)
   
          0.699
RB2654_13950
Uncharacterized protein (47 aa)
              0.665
RB2654_20663
Transcriptional regulatory protein (282 aa)
   
   
  0.552
RB2654_09319
Transcriptional regulator, LysR family protein (331 aa)
   
          0.542
RB2654_09799
Transcriptional regulatory protein (303 aa)
 
     
  0.523
RB2654_04179
Transcriptional regulator, AraC family protein (268 aa)
   
   
  0.511
RB2654_00035
Transcriptional regulator, LysR family protein (329 aa)
   
          0.463
RB2654_03654
L-lysine exporter, putative (202 aa)
         
  0.460
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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