STRINGSTRING
RB2654_15651 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_15651" - Anti-sigma B factor, putative in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_15651Anti-sigma B factor, putative (118 aa)    
Predicted Functional Partners:
RB2654_15656
Anti-sigma factor antagonist (114 aa)
 
     
  0.890
RB2654_05340
Uncharacterized protein (969 aa)
   
          0.778
RB2654_13615
Hpt domain protein (108 aa)
   
          0.777
RB2654_02005
Uncharacterized protein (144 aa)
   
          0.777
RB2654_21098
Uncharacterized protein (192 aa)
   
          0.774
RB2654_13620
Response regulator (433 aa)
   
          0.769
RB2654_03979
Uncharacterized protein (192 aa)
   
          0.750
RB2654_11613
Uncharacterized protein (251 aa)
   
          0.745
RB2654_04844
Uncharacterized protein (189 aa)
   
          0.742
RB2654_08577
Uncharacterized protein (293 aa)
   
          0.735
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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