STRINGSTRING
RB2654_16041 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_16041" - Membrane protein, putative in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_16041Membrane protein, putative (292 aa)    
Predicted Functional Partners:
RB2654_20033
ABC transporter, ATP binding/permease protein (593 aa)
   
      0.706
RB2654_17906
ABC multidrug efflux pump, fused ATPase and inner membrane subunits (610 aa)
   
      0.706
RB2654_17901
ABC multidrug efflux pump, fused ATPase and inner membrane subunits (607 aa)
   
      0.706
RB2654_12234
ATP-binding protein of ABC transporter (617 aa)
   
      0.706
RB2654_16036
Acetoacetyl-CoA reductase (240 aa)
              0.683
RB2654_04154
Phosphatidate cytidylyltransferase (286 aa)
     
      0.527
RB2654_16031
Uncharacterized protein (277 aa)
              0.503
truA
tRNA-uridine isomerase I ; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs (257 aa)
   
        0.485
tgt
tRNA-guanine transglycosylase ; Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hypermodified nucleoside queuosine (Q) (7-(((4,5-cis- dihydroxy-2-cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) (380 aa)
   
        0.445
RB2654_16026
Acetyl-CoA acetyltransferase (378 aa)
   
        0.444
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (10%) [HD]