STRINGSTRING
RB2654_16136 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_16136" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_16136Uncharacterized protein (368 aa)    
Predicted Functional Partners:
RB2654_16141
Uncharacterized protein (159 aa)
              0.697
RB2654_04854
ABC transporter, ATP-binding protein (604 aa)
 
   
  0.630
RB2654_16131
Dihydrodipicolinate reductase, bacterial (252 aa)
              0.576
RB2654_06102
ABC transporter, ATP-binding protein (551 aa)
 
   
  0.558
RB2654_03499
Uncharacterized protein (402 aa)
   
 
  0.534
rlmH
rRNA (pseudouridine-N3-)-methyltransferase RlmH ; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (156 aa)
 
        0.492
RB2654_02989
ABC transporter, ATP-binding protein (613 aa)
   
   
  0.472
prfC
Peptide chain release factor 3 ; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP (537 aa)
 
        0.469
RB2654_20408
Selenide, water dikinase, putative (728 aa)
   
          0.460
RB2654_12164
Ribosomal RNA small subunit methyltransferase B, putative (420 aa)
   
   
  0.452
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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