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rnhA protein (Maritimibacter alkaliphilus) - STRING interaction network
"rnhA" - Ribonuclease H in Maritimibacter alkaliphilus
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rnhARibonuclease H ; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (149 aa)    
Predicted Functional Partners:
RB2654_10393
DNA polymerase I (932 aa)
 
  0.959
RB2654_16276
Uncharacterized protein (195 aa)
     
      0.923
RB2654_13489
Putative DNA polymerase III, epsilon subunit and related 3’-5’exonuclease (230 aa)
 
 
  0.918
RB2654_16271
Membrane protein, putative (143 aa)
              0.880
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase ; Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) (322 aa)
              0.880
guaA
Glutamine amidotransferase ; Catalyzes the synthesis of GMP from XMP (526 aa)
   
   
  0.691
RB2654_22813
Single-stranded DNA-binding protein ; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (134 aa)
     
 
  0.662
RB2654_04194
Single-stranded DNA-binding protein ; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism (162 aa)
     
 
  0.662
RB2654_16261
Uncharacterized protein (118 aa)
              0.643
RB2654_16256
Bleomycin resistance protein (118 aa)
              0.643
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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