STRINGSTRING
RB2654_16351 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_16351" - Alanine dehydrogenase in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_16351Alanine dehydrogenase (372 aa)    
Predicted Functional Partners:
RB2654_02299
Alanine racemase ; Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids (349 aa)
       
  0.923
RB2654_16346
Transcriptional regulator, AsnC family protein (154 aa)
              0.774
RB2654_16356
Phosphoglycolate phosphatase ; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate (217 aa)
              0.655
RB2654_05977
Aspartate aminotransferase (400 aa)
         
  0.644
RB2654_03414
Aminotransferase, classes I and II (379 aa)
         
  0.644
RB2654_13700
Uncharacterized protein (162 aa)
       
    0.605
RB2654_15621
Putative aspartate aminotransferase (394 aa)
         
  0.491
RB2654_04224
Tyrosine recombinase XerC (315 aa)
              0.435
RB2654_01580
Uncharacterized protein (389 aa)
         
  0.430
RB2654_19813
Transcriptional regulator, AsnC family protein (151 aa)
              0.429
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (10%) [HD]