STRINGSTRING
RB2654_16876 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_16876" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_16876Uncharacterized protein (544 aa)    
Predicted Functional Partners:
RB2654_12119
Uncharacterized protein (106 aa)
   
          0.675
RB2654_16871
Uncharacterized protein (160 aa)
              0.625
RB2654_05300
Uncharacterized protein (136 aa)
   
          0.546
RB2654_05305
Head-tail adaptor, putative (112 aa)
   
          0.537
RB2654_16881
Uncharacterized protein (61 aa)
              0.482
RB2654_18116
DNA binding protein, putative (279 aa)
   
          0.468
RB2654_16886
Uncharacterized protein (86 aa)
              0.444
RB2654_03984
Uncharacterized protein (164 aa)
   
          0.427
RB2654_05310
Uncharacterized protein (197 aa)
   
          0.416
RB2654_06262
Uncharacterized protein (132 aa)
   
          0.406
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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