STRINGSTRING
RB2654_17241 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_17241" - Inner membrane protein CreD in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_17241Inner membrane protein CreD (467 aa)    
Predicted Functional Partners:
RB2654_17246
Succinate dehydrogenase iron-sulfur subunit (259 aa)
              0.508
RB2654_15921
Two-component sensor histidine kinase (592 aa)
   
   
  0.506
RB2654_15916
DNA-binding response regulator ChvI (233 aa)
   
   
  0.506
RB2654_17251
Succinate dehydrogenase flavoprotein subunit (601 aa)
              0.489
RB2654_17256
Succinate dehydrogenase, hydrophobic membrane anchor protein (125 aa)
              0.474
RB2654_17261
Succinate dehydrogenase cytochrome b-556 subunit (127 aa)
              0.472
RB2654_12409
Uncharacterized protein (609 aa)
   
          0.460
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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