STRINGSTRING
RB2654_17816 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_17816" - Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_17816Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein (502 aa)    
Predicted Functional Partners:
RB2654_17791
Peptide/opine/nickel uptake family ABC transporter, permease protein (315 aa)
 
  0.978
RB2654_17786
Peptide/opine/nickel uptake family ABC transporter, permease protein (273 aa)
  0.958
RB2654_06934
Oligopeptide ABC transporter permease protein (278 aa)
  0.940
RB2654_21468
Peptide/opine/nickel uptake family ABC transporter, permease protein (315 aa)
 
  0.938
RB2654_06939
Dipeptide transport system permease protein dppB (336 aa)
 
  0.930
RB2654_17121
Probable dipeptide transport system permease protein (303 aa)
  0.913
RB2654_17126
Probable dipeptide transport system permease protein (335 aa)
 
  0.900
RB2654_21478
Peptide/opine/nickel uptake family ABC transporter, ATP-binding protein (317 aa)
  0.862
RB2654_11718
Putative oligopeptide ABC transporter, permease protein (307 aa)
 
  0.860
RB2654_17111
Probable ATP-binding component of ABC dipeptide transporter (316 aa)
  0.859
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (7%) [HD]