Automated, unsupervised textmining - searching for proteins that are frequently mentioned together.
Genes that are sometimes fused into single open reading frames.
STRING allows inspection of the interaction evidence for any given network. Choose any of the viewers above (disabled if not applicable in your network).
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
Esterase EstC, putative (237 aa)
Predicted Functional Partners:
3-oxoadipate enol-lactone hydrolase (264 aa)
Oxidoreductase, zinc-binding dehydrogenase family protein (363 aa)
Uncharacterized protein (141 aa)
Uncharacterized protein (140 aa)
Uncharacterized protein (91 aa)
Uncharacterized protein (288 aa)
NAD-dependent deacetylase (228 aa)
Metallo-beta-lactamase family protein (331 aa)
Autoinducer synthesis protein (213 aa)
Uncharacterized protein (295 aa)
Your Current Organism:
NCBI taxonomy Id: 314271 Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654