STRINGSTRING
RB2654_17996 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_17996" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_17996Uncharacterized protein (126 aa)    
Predicted Functional Partners:
RB2654_17991
Uncharacterized protein (705 aa)
              0.859
RB2654_12804
Uncharacterized protein (230 aa)
   
          0.731
RB2654_17986
Cyclic nucleotide-binding domain protein (238 aa)
              0.692
RB2654_04576
Uncharacterized protein (270 aa)
   
          0.675
RB2654_16931
Uncharacterized protein (128 aa)
   
          0.661
RB2654_12319
Uncharacterized protein (163 aa)
   
          0.560
RB2654_18011
HlyD family secretion protein (435 aa)
              0.546
RB2654_18006
ABC transporter HlyB/MsbA family protein (712 aa)
              0.546
RB2654_18001
Uncharacterized protein (460 aa)
              0.546
RB2654_10274
Uncharacterized protein (178 aa)
   
          0.492
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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