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RB2654_18006 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_18006" - ABC transporter HlyB/MsbA family protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_18006ABC transporter HlyB/MsbA family protein (712 aa)    
Predicted Functional Partners:
RB2654_18011
HlyD family secretion protein (435 aa)
 
  0.996
RB2654_18001
Uncharacterized protein (460 aa)
 
 
  0.989
RB2654_12339
Probable HlyD family secretion protein (389 aa)
 
  0.975
RB2654_10668
Type I secretion membrane fusion protein, HlyD family protein (461 aa)
 
 
  0.975
RB2654_08762
Hemolysin-type calcium-binding toxin (463 aa)
 
     
  0.815
RB2654_14100
Possible Zn-dependent metalloprotease (622 aa)
 
     
  0.790
RB2654_06719
Uncharacterized protein (1426 aa)
 
     
  0.777
RB2654_08752
Protease PrtA (415 aa)
 
     
  0.764
RB2654_07486
Uncharacterized protein (2260 aa)
 
          0.742
RB2654_12354
Uncharacterized protein (1345 aa)
 
   
  0.725
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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