STRINGSTRING
RB2654_18036 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_18036" - Putative LysR-family transcriptional regulator in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_18036Putative LysR-family transcriptional regulator (302 aa)    
Predicted Functional Partners:
RB2654_12514
Transcriptional regulator, LysR family protein (298 aa)
   
          0.762
RB2654_05857
Transcriptional regulator, LysR family protein (319 aa)
   
        0.716
RB2654_23278
Probable transcriptional regulator (301 aa)
   
          0.706
RB2654_02389
Transcriptional regulator, LysR family protein (298 aa)
   
          0.694
RB2654_23248
Putative transcription regulator protein (408 aa)
   
          0.650
RB2654_18041
Probable immunogenic protein (318 aa)
              0.591
RB2654_09319
Transcriptional regulator, LysR family protein (331 aa)
   
          0.546
RB2654_12994
Uncharacterized protein (342 aa)
         
  0.443
RB2654_13730
Probable transcriptional regulator (293 aa)
   
          0.433
RB2654_18056
Uncharacterized protein (549 aa)
              0.426
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (10%) [HD]