STRINGSTRING
RB2654_18041 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_18041" - Probable immunogenic protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_18041Probable immunogenic protein (318 aa)    
Predicted Functional Partners:
RB2654_18046
Uncharacterized protein (638 aa)
 
          0.942
RB2654_21588
Uncharacterized protein (645 aa)
 
          0.869
RB2654_09419
Uncharacterized protein (807 aa)
 
          0.869
RB2654_06649
Hypothetical permease (656 aa)
 
          0.869
RB2654_11753
TRAP transporter, 4TM/12TM fusion protein (872 aa)
 
          0.868
RB2654_00395
Uncharacterized protein (614 aa)
 
          0.868
RB2654_00105
Uncharacterized protein (616 aa)
 
          0.868
RB2654_12389
Uncharacterized protein (768 aa)
 
          0.863
RB2654_09424
TRAP-type uncharacterized transport system, periplasmic component (323 aa)
   
          0.778
RB2654_00400
Uncharacterized protein (329 aa)
   
          0.778
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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