STRINGSTRING
RB2654_18096 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_18096" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_18096Uncharacterized protein (260 aa)    
Predicted Functional Partners:
RB2654_18091
Putative glycerol-3-phosphate cytidyltransferase (143 aa)
              0.859
RB2654_05887
Uncharacterized protein (247 aa)
   
          0.741
RB2654_17686
FoF1 ATP synthase, subunit C (78 aa)
   
          0.726
RB2654_13544
Coproporphyrinogen III oxidase (348 aa)
   
          0.696
RB2654_18086
Uncharacterized protein (124 aa)
              0.619
RB2654_21348
Uncharacterized protein (182 aa)
   
          0.592
RB2654_17581
Phosphotransferase family protein (340 aa)
   
          0.582
pth
Peptidyl-tRNA hydrolase ; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (227 aa)
   
          0.579
RB2654_10079
NUDIX hydrolase (323 aa)
   
          0.493
RB2654_18081
Uncharacterized protein (73 aa)
              0.485
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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