STRINGSTRING
RB2654_18116 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_18116" - DNA binding protein, putative in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_18116DNA binding protein, putative (279 aa)    
Predicted Functional Partners:
RB2654_18121
Uncharacterized protein (75 aa)
 
          0.899
RB2654_10339
Glyoxalase family protein (120 aa)
   
          0.611
RB2654_05607
MOSC domain protein (197 aa)
   
          0.574
RB2654_01490
Fatty acid desaturase (334 aa)
 
          0.566
RB2654_06187
Phospholipase D/Transphosphatidylase (523 aa)
   
          0.548
RB2654_10813
Transcriptional regulator, TetR family protein (207 aa)
   
          0.544
RB2654_13044
Uncharacterized protein (130 aa)
   
          0.530
RB2654_16876
Uncharacterized protein (544 aa)
   
          0.468
RB2654_05300
Uncharacterized protein (136 aa)
   
          0.466
RB2654_04631
Uncharacterized protein (171 aa)
   
          0.462
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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