STRINGSTRING
RB2654_19498 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_19498" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_19498Uncharacterized protein (154 aa)    
Predicted Functional Partners:
RB2654_19508
Uncharacterized protein (215 aa)
              0.859
RB2654_19503
Putative lipase (310 aa)
              0.859
RB2654_03089
Uncharacterized protein (426 aa)
 
          0.812
RB2654_13174
Uncharacterized protein (295 aa)
 
          0.753
RB2654_19533
Uncharacterized protein (627 aa)
 
          0.632
RB2654_19513
Shikimate dehydrogenase (NADP(+)) ; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) (294 aa)
              0.612
RB2654_07576
Uncharacterized protein (182 aa)
 
          0.585
RB2654_19518
Putative ABC transporter periplasmic substrate-binding protein (324 aa)
              0.565
RB2654_13189
Feruloyl-CoA synthase (608 aa)
 
          0.468
RB2654_07586
Bacterial regulatory protein, MarR (161 aa)
 
          0.454
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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