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RB2654_19523 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_19523" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_19523Uncharacterized protein (173 aa)    
Predicted Functional Partners:
RB2654_19528
Putative permease protein (431 aa)
 
          0.917
RB2654_19518
Putative ABC transporter periplasmic substrate-binding protein (324 aa)
 
          0.914
RB2654_19533
Uncharacterized protein (627 aa)
 
          0.900
RB2654_21293
C4-dicarboxylate-binding periplasmic protein (328 aa)
 
          0.868
RB2654_19513
Shikimate dehydrogenase (NADP(+)) ; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) (294 aa)
              0.629
RB2654_23268
Putative extracellular solute-binding protein (328 aa)
 
          0.589
RB2654_16421
Tail fiber protein, putative (1209 aa)
   
          0.574
RB2654_21288
Regulatory protein GntR, HTH-GntR, C-terminal (233 aa)
 
          0.572
RB2654_03529
Uncharacterized protein (286 aa)
   
          0.453
RB2654_12054
Uncharacterized protein (548 aa)
   
          0.444
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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