STRINGSTRING
RB2654_19893 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_19893" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_19893Uncharacterized protein (235 aa)    
Predicted Functional Partners:
RB2654_19898
Uncharacterized protein (122 aa)
              0.624
RB2654_20413
Uncharacterized protein (271 aa)
   
          0.575
RB2654_19888
Uncharacterized protein (161 aa)
              0.541
RB2654_16056
Uncharacterized protein (72 aa)
   
          0.496
RB2654_21318
Putative metallo-phosphoesterase (216 aa)
   
          0.491
RB2654_08232
Uncharacterized protein (183 aa)
   
          0.489
RB2654_06032
Uncharacterized protein (138 aa)
   
          0.486
RB2654_19903
Tetracycline resistance protein (406 aa)
              0.482
RB2654_05485
Uncharacterized protein (153 aa)
   
          0.463
RB2654_21173
Uncharacterized protein (307 aa)
   
          0.439
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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