STRINGSTRING
RB2654_19993 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_19993" - Transcriptional regulator in Maritimibacter alkaliphilus
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_19993Transcriptional regulator (147 aa)    
Predicted Functional Partners:
RB2654_04004
Putative aminotransferase (348 aa)
   
 
  0.688
RB2654_04089
Uncharacterized protein (147 aa)
 
   
  0.675
RB2654_08447
Putative heat shock protein DnaJ (226 aa)
 
 
  0.673
RB2654_19988
Smp-30/Cgr1 family protein (280 aa)
              0.611
RB2654_04661
Ferredoxin--NADP reductase (283 aa)
 
     
  0.570
RB2654_16181
Uncharacterized protein (141 aa)
 
          0.535
RB2654_04939
Iron-sulfur cluster assembly family protein (109 aa)
   
   
  0.535
RB2654_03304
Iron-sulfur cluster assembly accessory protein (121 aa)
   
   
  0.535
RB2654_12474
Probable bacterial hemoglobin (140 aa)
   
   
  0.505
RB2654_10798
Possible dioxygenase reductase subunit (361 aa)
         
  0.504
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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