STRINGSTRING
RB2654_20298 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_20298" - Nodulation protein d1 in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_20298Nodulation protein d1 (312 aa)    
Predicted Functional Partners:
RB2654_20303
Uncharacterized protein (378 aa)
 
          0.900
RB2654_20268
Uncharacterized protein (386 aa)
 
          0.801
RB2654_19493
Uncharacterized protein (375 aa)
 
          0.741
RB2654_02809
Uncharacterized protein (374 aa)
 
          0.722
RB2654_20293
Oxidoreductase, short-chain dehydrogenase/reductase family protein (255 aa)
              0.642
RB2654_20273
Glyoxalase family protein (311 aa)
 
          0.614
RB2654_19483
Glyoxalase family protein (324 aa)
 
          0.613
RB2654_20318
Fumarylacetoacetate hydrolase family protein (321 aa)
 
          0.498
RB2654_20388
Uncharacterized protein (203 aa)
 
          0.494
RB2654_16216
Putative transcription regulator protein (298 aa)
   
          0.464
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
Server load: low (9%) [HD]