STRINGSTRING
RB2654_20488 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_20488" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_20488Uncharacterized protein (139 aa)    
Predicted Functional Partners:
RB2654_20483
Uncharacterized protein (273 aa)
              0.721
RB2654_20493
Uncharacterized protein (155 aa)
              0.670
RB2654_12044
N-formylglutamate amidohydrolase family protein (286 aa)
 
          0.570
metG
Methionyl-tRNA synthetase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (585 aa)
              0.501
RB2654_04914
Segregation and condensation protein A (263 aa)
   
          0.492
RB2654_20508
Uncharacterized protein (148 aa)
              0.465
RB2654_20503
Membrane protein, putative (298 aa)
              0.465
RB2654_07836
NADH-ubiquinone oxidoreductase (124 aa)
   
          0.444
RB2654_22253
Uncharacterized protein (240 aa)
              0.435
RB2654_13449
Hydrolase, carbon-nitrogen family protein (272 aa)
              0.435
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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