STRINGSTRING
RB2654_20493 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_20493" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_20493Uncharacterized protein (155 aa)    
Predicted Functional Partners:
RB2654_20488
Uncharacterized protein (139 aa)
              0.670
metG
Methionyl-tRNA synthetase ; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation (585 aa)
              0.644
RB2654_20513
Outer membrane lipoprotein Blc (171 aa)
 
          0.617
RB2654_20508
Uncharacterized protein (148 aa)
              0.594
RB2654_20503
Membrane protein, putative (298 aa)
              0.594
RB2654_20483
Uncharacterized protein (273 aa)
              0.556
RB2654_21058
Uncharacterized protein (142 aa)
   
          0.484
RB2654_20478
Uncharacterized protein (991 aa)
 
          0.480
RB2654_20598
Uncharacterized protein (112 aa)
   
          0.433
RB2654_20518
Oxidoreductase, aldo/keto reductase family protein (344 aa)
              0.418
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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